Integrated Publishing Toolkit(IPT)

free and open access to biodiversity data

INRA-Versailles Arabidopsis natural variants

Latest version published by Institut National de la Recherche Agronomique (INRA) on Aug 27, 2014 Institut National de la Recherche Agronomique (INRA)

The Versailles Arabidopsis Stock Center provides seeds useful to the international research community. It is based in Versailles (France), at the Jean-Pierre Bourgin Institute (IJPB) of the National Institute for Agricultural Research (INRA). Seed stocks available for distribution include: 54915 T-DNA insertion lines corresponding to 46236 Flanking Sequence Tags (FST) more than 600 natural accessions (ecotypes) 132 F2 mapping populations 16 Recombinant Inbred Line (RIL) populations 3 nearly-isogenic line sets (HIF: Heterogeneous Inbred Family) a panel of epigenetic recombinant inbred lines (epiRIL)

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 777 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 777 records in English (23 KB) - Update frequency: unknown
Metadata as an EML file download in English (7 KB)
Metadata as an RTF file download in English (7 KB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

The seeds were provided by the Versailles Arabidopsis Stock Center (http://publiclines.versailles.inra.fr/)

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is Institut National de la Recherche Agronomique (INRA). This [DATA(BASE)] is made available under the Public Domain Dedication and License v1.0 whose full text can be found at: http://www.opendatacommons.org/licenses/pddl/1.0/.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: 3bad05e1-2fe0-469e-9560-45e7d1d1b70c.  Institut National de la Recherche Agronomique (INRA) publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF France.

Keywords

Occurrence; genetic resources; Arabidopsis

Contacts

Who created the resource:

Christine Camilleri
Responsable scientifique
INRA Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech 78000 Versailles FR 33130833316
http://www-ijpb.versailles.inra.fr/en/plateformes/cra/index.html

Who can answer questions about the resource:

Christine Camilleri
Responsable scientifique
INRA Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech 78000 Versailles FR 33130833316
http://www-ijpb.versailles.inra.fr/en/plateformes/cra/index.html

Who filled in the metadata:

Christine Camilleri
Responsable scientifique
INRA Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech 78000 Versailles FR 33130833316
http://www-ijpb.versailles.inra.fr/en/plateformes/cra/index.html

Who else was associated with the resource:

User
Christine Camilleri
Responsable scientifique
INRA Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech 78000 Versailles FR 33130833316
http://www-ijpb.versailles.inra.fr/en/plateformes/cra/index.html

Geographic Coverage

World

Bounding Coordinates South West [-90, -180], North East [90, 180]

Taxonomic Coverage

No Description available

Species  Arabidopsis thaliana

Bibliographic Citations

  1. Samson F et al. (2002) FLAGdb/FST : a database for mapped flanking insertion sites (FSTs) of Arabidopsis thaliana T-DNA transformants. Nucleic Acids Res. 30 (1):94-7.
  2. McKhann H I, Camilleri C, Bérard A, Bataillon T, David J L, Reboud X, Le Corre V, Caloustian C, Gut I G, Brunel D.(2004). Nested core collections maximizing genetic diversity in Arabidopsis thaliana. Plant J 38 : 193-202.
  3. Simon M, Simon A, Martins F, Botran L, Tisné S, Granier F, Loudet O and Camilleri C (2012). DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. The Plant Journal 69: 1094-1101.
  4. Simon, M., Loudet, O., Durand, S., Bérard, A., Brunel, D., Sennesal, F-X, Durand-Tardif, M., Pelletier, G. and Camilleri, C. (2008). QTL mapping in five new large RIL populations of Arabidopsis thaliana genotyped with consensus SNP markers. Genetics 178: 2253-2264.
  5. Johannes F., Porcher E., Teixeira F., Saliba-Colombani V., Simon M., Agier N., Bulski A., Albuisson J., Heredia F. Audigier P., Bouchez D., Dillmann C., Guerche P., Hospital F., Colot V.(2009). Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5(6): e1000530.

Additional Metadata

Alternative Identifiers http://www.gbif.fr/ipt/resource.do?r=inra_arabidopsis