Integrated Publishing Toolkit(IPT)

free and open access to biodiversity data

Abundances indices and biological traits of juvenile salmon sampled in the Nivelle river (France)

Versão mais recente publicado por Institut National de la Recherche Agronomique (INRA) em Apr 24, 2019 Institut National de la Recherche Agronomique (INRA)

A survey started in 2003 is conducted every year in early autumn (late September to early October) to quantify the abundance of juvenile Atlantic salmon in the Nivelle in Pays Basque. The electric fishing protocol of Prévost and Baglinière (1995) is used. It targets Atlantic salmon young of the year (0+ parr), but older fish (juvenile salmon ≥1+) are also caught and included in this dataset. Sampling is restricted to areas with shallow running water flowing on coarse bottom substrate, i.e. the preferred habitat of young of the year salmon. The data consist of abundance indices and biological traits measured on the fish sampled: sex, maturity status, length, weight and age. The latter is ascertained from scale samples taken from the fish which size does not allow to determine their age unambiguously. The survey is carried out under the Research Observatory on Diadromes Fishes in Coastal Streamss (ERO DiaPFC) program. The data are stored in the database of the ERO. They are used to develop predictive models and tools for providing scientific advice to improve the management of this heritage species.

Registros de Dados

Os dados deste recurso de ocorrência foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 4,940 registros. Também existem 2 tabelas de dados de extensão. Um registro de extensão fornece informações adicionais sobre um registro do núcleo. O número de registros em cada tabela de dados de extensão é ilustrado abaixo.

  • Occurrence (core)
    4940
  • MeasurementOrFact 
    19760
  • Event 
    276

Este IPT armazena os dados e, portanto, serve como um repositório de dados. Os dados e os metadados do recurso estão disponíveis para download no seção de downloads. A tabela de versões lista outras versões do recurso que foram disponibilizadas ao público e permite o rastreamento das alterações realizadas no recurso ao longo do tempo.

Downloads

Baixe a última versão do recurso de dados, como um Darwin Core Archive (DwC-A) ou recurso de metadados, como EML ou RTF:

Dados como um arquivo DwC-A download 5,251 registros em English (197 KB) - Frequência de atualização: desconhecido
Metadados como um arquivo EML download em English (20 KB)
Metadados como um arquivo RTF download em English (19 KB)

Versões

A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.

Como citar

Pesquisadores deveriam citar esta obra da seguinte maneira:

Lange F., Guéraud F., Huchet E., Rives J. and Prévost E. 2017. Abundances and biological traits of the juveniles salmon sampled in the survey of Salmon abundance Indices in the Nivelle river (France).

Direitos

Pesquisadores devem respeitar a seguinte declaração de direitos:

O editor e o detentor dos direitos deste trabalho é Institut National de la Recherche Agronomique (INRA). This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF Registration

Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: e96db990-bd86-4a79-89a2-446844a27811.  Institut National de la Recherche Agronomique (INRA) publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por GBIF France.

Palavras-chave

Samplingevent; Population density; population distribution; catch effort; salmo salar; salmon

Contatos

Quem criou esse recurso:

Frédéric Lange
Researcher
INRA-ECOBIOP Aquapôle - Ibarron 64310 St-Pée-sur-Nivelle FR +33559515975
François Guéraud
INRA-ECOBIOP Aquapôle - Ibarron 64310 St-Pée-sur-Nivelle FR +33559515942
Emmanuel Huchet
Researcher
INRA-ECOBIOP Aquapôle - Ibarron 64310 St-Pée-sur-Nivelle FR +33559515979
Jacques Rives
Researcher
INRA-ECOBIOP Aquapôle - Ibarron 64310 St-Pée-sur-Nivelle FR +33559515984
Etienne Prévost
Researcher
INRA-ECOBIOP Aquapôle - Ibarron 64310 St-Pée-sur-Nivelle FR +33559515983

Quem pode responder a perguntas sobre o recurso:

Didier Azam
Researcher
INRA-U3E 65 rue de St Brieuc, CS 84215 35042 Rennes FR +33223485786
Frédéric Marchand
Researcher
INRA-U3E 65 rue de St Brieuc, CS 84215 35042 Rennes FR +33223485786

Quem preencher os metadados:

Frédéric Marchand
Researcher
INRA-U3E 65 rue de St Brieuc, CS 84215 35042 Rennes FR +33223485786

Quem mais foi associado com o recurso:

Programador
Nadine Herrard
Programmer
INRA-U3E 65 rue de St Brieuc, CS 84215 35042 Rennes FR +33223485786
Distribuidor
GBIF GBIF France
IT support
GBIF France MNHN Géologie CP48, 43 rue Buffon 75005 Paris FR +33140798065

Cobertura Geográfica

The Nivelle river in Basque Country (France). http://services.sandre.eaufrance.fr/Courdo/Fiche/client/fiche_courdo.php?CdSandre=S52-0400

Coordenadas delimitadoras Sul Oeste [43.25, -1.67], Norte Leste [43.39, -1.48]

Cobertura Taxonômica

Nenhuma descrição disponível

Espécie  Salmo salar

Cobertura Temporal

Data Inicial / Data final 2004-10-11 / 2017-09-16

Dados Sobre o Projeto

The Research Observatory on Diadromous Fish in Coastal Streams (ORE DiaPFC) is a research infrastructure steered by INRA in partnership with AFB and part of the AFB-INRA R&D center. It's focused on the study of the evolution of diadromous fish populations under the influence human induced environmental changes that affect these rivers (mainly climate and effects of agriculture). Diadromous species of primary interest are salmon (Salmo salar), trout (Salmo trutta), eel (Anguilla Anguilla), shads (Alosa sp.), and lampreys (Lampetra sp. and Petromyzon marinus). These species are threatened by the consequences of human activities. They are flagship species for the biodiversity of coastal streams. Nowadays, these streams are the main refuges for diadromous fish that have disappeared or dramatically declined on larger rivers. This ERO DiaPFC is a Research Infrastructure based on four coastal streams of the Atlantic and Channel coast of France: the Bresle and the Oir in Normandy, the Scorff in Brittany and the Nivelle in the Pays Basque. These four rivers are equipped with diadromous fish trapping facilities and are thoroughly and continuously surveyed from the mid 1980s. They are twinned with experimental ecology facilities located in Rennes (Brittany) and Saint-Pée-sur-Nivelle (Pays Basque). This set of facilities is complemented by individual-based eco-genetic simulators for in silico experimentation on virtual populations.

Título Observatoire de Recherche en Environnement des poissons diadromes sur les Fleuves Côtiers - Ecological Research Observatory on Diadromous Fish in coastal streams
Financiamento - INRA : French National Institute for Agricultural Research - AFB : French Agency for Biodiversity - FEAMP : (European Fund for Maritime Affairs and Fisheries). Since 2017, data collected on salmon in the framework of the ORE DiaPFC have been included in the national program for the data collect in support of scientific advice for the Common Fisheries Policy (DCF - Work Plan for data collection in the fisheries and aquaculture sectors 2017-2019) for the European regulations on fisheries management. In this context, INRA and AFB contribute to the National Work Program piloted by the DPMA of the Ministry of the Environment. This program is financially supported by FEAMP
Descrição da Área de Estudo This infrastructure Research relies on three coastal streams of the Atlantic facade Channel, the Bresle and Oir in Normandy (Manche), the Scorff in Brittany (Morbihan) and the Nivelle in the Basque Country (Pyrenees Atlantiques).
Descrição do Design The issue of 'Research Observatory on Diadromes Fish in Coastal Rivers (ORE DiaPFC) is to study the evolution of diadromous fish populations as a result of environmental changes (climate change and changes related to agriculture ) that affect these rivers.

O pessoal envolvido no projeto:

Pesquisador Principal
Etienne Prévost

Métodos de Amostragem

In the Nivelle, sampling is conducted at 20 sites spread along the mainstem, 6 along the main tributary (i.e. the Lurgorrieta) and 2 distributed on 2 smaller tributaries. All sites are located in the area of the hydrographic network colonized by Atlantic salmon. The sites are visited once a year at the beginning of autumn (end of September to early October). Sampling events by site and by year are indicated in table 3. 8 sites sampled in the first years of the survey were abandoned afterwards.

Área de Estudo Nivelle river, CdSandre=S52-0400 Latitude between 43.2426 and 43.3912; longitude between -1.4799 and -1.6694 Source latitude and longitude : 43.2173 -1.5231 Last confluence point latitude and longitude : 43.3854 -1.6639 The Nivelle is a 39 km long coastal stream of Pays Basque. It has its source in Spain and flows into the Bay of Biscay at Saint-Jean-de-Luz. Its drainage basin has a surface area of 238 km2, and is dominated by marly-calcareous formations. It is essentially agro-pastoral with more than 50% of the land area made of moors (Dumas, 2003). The oceanic climate, mild and wet (1700 mm year-1 in St-Pe´e-sur-Nivelle), provides a mean annual discharge of 5.4m3 s"1 downstream from the confluence of the main tributary, the Lurgorrieta, and 9m3 s-1 at the mouth. The water, neutral to slightly alkaline, is of good quality upstream from Saint-Pée-sur-Nivelle, but deteriorates downstream.

Descrição dos passos do método:

  1. Fish capture was carried out with a backpack electrofishing equipment. The same gear was used since the beginning of the data collection, namely a Martin Pêcheur from DREAM Electronique, It is tuned to produce a pulsed DC with a 400 Hz frequency, 250-300 volts and a square-waveform between 4 and 10% duty cycle. Fishing is operated according to the following steps : 1 Two large dip-nets with metal frames are placed facing the current, lying on the bottom, and kept at a fixed position. 2 The anode scans an area of about 4-5 m upstream of the dip-nets in the vein of water filtered by them. 3 Fish attracted by the anode and shocked go down into the nets guided by the electrode and driven by the water flow. If necessary, the fish stuck on the bottom or in aquatic vegetation are recovered by a small hand net. 4 Individuals are transferred into a bucket previously filled with water. 5 The whole team moves laterally several meters out of the area that has just been disturbed by the electric field, the carrier of the electrofishing gear taking care of not to step on the area he will next explore with the anode. When a bank is reached, the progression is a few meters upstream. Then steps 1-5 are repeatedThe sampling at a given site stops after 5 minutes of actual fishing – i.e. the duration when the electric field is applied in the water - measured directly on the counter of the electric fishing equipment. Juvenile abundance is quantified by the number of individuals captured for a unit effort (5 minutes of fishing under the conditions specified above). Biometric measurement of the fish are recorded after their anesthesia with benzocaïne. The fish length is measured from the tip of the mouth to the fork of the caudal fin (1 millimeter precision). Fish are then weighed (0.2 g precision) and maturity status is assessed by a gentle pressure on the belly that allows to get sperm in mature males. All the fish sampled are then released in their original site.
  2. Age is verified from scale reading according to standard methods described by (Baglinière and Le Louarn, 1987) and (Richard and Bagliniere, 1990).

Dados de Coleção

Nome da Coleção Colisa - Collection of Ichtyological Samples
Identificador da Coleção http://147.99.222.8:8080/BDEI/
Métodos de preservação do espécime Seco,  Outro,  Sem tratamento
Unidades de Curadoria Entre 4,360 e 4,360 Fins ,  Entre 1,156 e 1,156 Scales

Citações bibliográficas

  1. Prévost E., Baglinière J.-L., 1995. Présentation et premiers éléments de mise au point d'une méthode simple d'évaluation du recrutement en juvéniles de saumon atlantique (Salmo salar) de l'année en eau courante, p. 39-48. In Gascuel D., Durand J.L., Fonteneau A., (Eds.) Les recherches françaises en évaluation quantitative et modélisation des ressources et des systèmes halieutiques. Colloques et séminaires, ORSTOM éditions, Paris.
  2. Prévost E., Nihouarn A., 1999. Relation entre indicateur d'abondance de type CPUE et estimation de densité par enlèvements successifs pour les juvéniles de saumon atlantique (Salmo salar L.) de l'année. Bull. Fr. Pêche Piscic., 352 : 19-30.
  3. Baglinière, J. L., and Le Louarn, H. 1987. Caractéristiques scalimétriques des principales espèces de poissons d’eau douce de France. Bulletin Français de la Pêche et de la Pisciculture: 1–39.
  4. Richard, A., and Bagliniere, J. L. 1990. Description et interprétation des écailles de truites de mer (Salmo trutta L.) de deux rivières de Basse-Normandie : l’Orne et la Touques. Bulletin Français de la Pêche et de la Pisciculture: 239–257.
  5. Marchand, F. et al (2017). Abundance indices and biological traits of juvenile salmon (Salmo salar) sampled in three rivers on the Atlantic and Channel coasts (France). Biodiversity Data Journal 5, e15125.

Metadados Adicionais

This data set is intended to be updated annually and is the subject of a new DOI every time.

Identificadores alternativos e96db990-bd86-4a79-89a2-446844a27811
http://ipt.gbif.fr/resource?r=inra_rennes_nivelle